collage_image
Supp_dat_expr.tgz - Stem Cell Matrix expression data in R
collage_image
consensus_SNMF.r - Bioconductor sNMF implementation
collage_image
Supp_dat_nmf.tgz - sNMF outputdata for further analysis
collage_image
assess_clustring_A.r - R script for analyzing sNMF data
collage_image
assess_clustring_B.r - R script for analyzing sNMF data
collage_image
plot_tab2.r
collage_image
Supp_dat_genesets.tgz - Geneset analysis Setup
collage_image
write_newick.r - writes Newick files for upload in tree analysis software (e.g. TreeDyn)
collage_image
write_tlf.r - writes TreeDyn compatible annotation file from clustering results
collage_image
Mouse fibroblasts, transformed cell lines, EpiSC, ePSC, iPSC dataset and scripts


Questions/Inquiries/Comments on this R/Bioconductor Script section? -

Please contact Roy Williams (royw@burnham.org) or Dennis Kostka (dkostka@ucdavis.edu)